We Build the Systems That
Make Lab Data Usable
Quantivum builds databases, dashboards, automated pipelines, and specialized analysis tools for research labs — so your team spends time on science, not manual data work.
From internal portals to reproducible workflows. Built by scientists, for scientists.
The Problem
Labs Lose Time to Manual Work and Scattered Data
Most lab teams have the expertise. What they don't have is engineering support to turn manual processes into reliable systems.
Scattered Data
Results live in spreadsheets, lab notebooks, email threads, and shared drives. No single source of truth. Finding old data takes longer than generating new data.
Manual Repetition
The same QC checks, reporting steps, and formatting done by hand every batch. Skilled scientists doing copy-paste work that a pipeline should handle.
Fragile Tooling
One-off scripts that only one person understands. No tests, no documentation, no containers. When that person leaves, the workflow breaks.
What We Build
Systems That Remove Manual Work
We don't sell analysis. We build the software and infrastructure that makes your lab's data reliable, accessible, and automated.
Lab Databases & Portals
Replace scattered spreadsheets with a single, searchable system. Track samples, results, metadata, and methods — with role-based access and full audit trails.
- Searchable result databases
- Internal lab portals & LIMS
- Secure APIs & data export
Workflow Automation & Pipelines
Turn repetitive data processing into automated, reproducible pipelines. From raw data to final reports — containerized, tested, and version-controlled.
- QC & reporting automation
- Reproducible analysis pipelines
- Docker & cloud deployment
Dashboards & Scientific Apps
Interactive tools your team actually uses. QC dashboards, data explorers, reporting interfaces — built for your specific workflow, not a generic template.
- QC visualization & monitoring
- Internal scientific tools
- Custom web applications
Proof of Work
Products We've Built
Tools and platforms born from real lab problems.
MRMpipe
Automated peak review and quantification for targeted LC-MS workflows. Handles peak detection, overlapping signal deconvolution, cross-sample QC, and ML confidence scoring in a single run.
SysQuan
Searchable peptide panel database with QC review and automated transition list export. Replaced scattered spreadsheets with a single source of truth — lookup time from minutes to instant.
Full Capabilities
How We Help Labs
Every project is different. Here's the range of what we build.
Bioinformatics Pipelines
End-to-end data processing from raw files to publication-ready results. Containerized and reproducible.
ML & QC Models
Custom machine learning models for scoring, classification, and quality control. Delivered as APIs or packages.
Scientific Databases
Custom database platforms with search, export, and secure REST APIs. Built on Django + PostgreSQL.
Cloud Pipelines
Containerized workflows on AWS, GCP, or on-prem. Snakemake, Nextflow, monitoring and orchestration.
Interactive Dashboards
Streamlit, React, or Django apps for QC visualization, data navigation, and filtering.
Custom Projects
Need something specific? We consult, prototype, and deliver — tailored to your lab's exact needs.
Founded by Dr. Peter Kubiniok — proteomics scientist, 15+ years building scientific software and data systems, and author of 12 peer-reviewed papers including Nature Communications.
Published & Trusted
Have a workflow problem?
Tell us what's slowing your team down. We'll scope the project and show you what's possible.
or email contact@quantivum.com